Shading correction (online) for fluorescent images in epifluorescent microscopy
The issue : Many users have complained over the years about the presence of tilling artifacts when they decide to make mosaic images. Namely, it is possible to see lines or boxes through the length and width of the tiled image they acquired. When using brightfield microscopy, this is easily fixed by acquiring an empty image with the same settings of light and focus distance, and then use that image as the reference for shading correction in the program they are using. With fluorescence, this is more complicated because the user needs a fluorescent homogeneous background to focus on. I tried buying fluorescent slides for that purpose, but the results are widely variable, depending on the quality and ease of focus of the slides used. Solution : I recently acquired calibration beads from Invitrogen ( InSpeck Green Microscope Image Intensity Calibration Kit, wavelength 505/515 nm, 2.5 micrometer size, reference I7219 ) that I was intending to use for another purpose. I generally...